@inproceedings{GerhardsBelloumBerretzetal.2010, author = {Gerhards, Michael and Belloum, Adam and Berretz, Frank and Sander, Volker and Skorupa, Sascha}, title = {A history-tracing XML-based provenance framework for workflows}, series = {The 5th Workshop on Workflows in Support of Large-Scale Science}, booktitle = {The 5th Workshop on Workflows in Support of Large-Scale Science}, publisher = {IEEE}, address = {New York}, isbn = {978-1-4244-8989-3}, doi = {10.1109/WORKS.2010.5671873}, pages = {10 Seiten}, year = {2010}, abstract = {The importance of validating and reproducing the outcome of computational processes is fundamental to many application domains. Assuring the provenance of workflows will likely become even more important with respect to the incorporation of human tasks to standard workflows by emerging standards such as WS-HumanTask. This paper addresses this trend by an actor-based workflow approach that actively support provenance. It proposes a framework to track and store provenance information automatically that applies for various workflow management systems. In particular, the introduced provenance framework supports the documentation of workflows in a legally binding way. The authors therefore use the concept of layered XML documents, i.e. history-tracing XML. Furthermore, the proposed provenance framework enables the executors (actors) of a particular workflow task to attest their operations and the associated results by integrating digital XML signatures.}, language = {en} } @misc{JansenBehbahaniLaumenetal.2010, author = {Jansen, Sebastian and Behbahani, Mehdi and Laumen, Marco and Kaufmann, Tim and Hormes, Marcus and Schmitz-Rode, Thomas and Behr, Marek and Steinseifer, Ulrich}, title = {3D stereo-PIV validation for CFD-simulation of steady flow through the human aorta using rapid-prototyping techniques}, year = {2010}, language = {en} } @article{BogoyavlenskiyDigelBerezin1997, author = {Bogoyavlenskiy, Andrey P. and Digel, Ilya and Berezin, Vladimir E.}, title = {Assessment of dot-blot ELISA sensitivity on membrane sorbent using various peroxidase substrates}, year = {1997}, abstract = {The sensitivity of the peroxidase reaction in dot-blot ELISA significantly depends on the substrate. The highest sensitivity is observed using benzidine and diamine- phenol combinations as the substrates due to the reaction of the coupled oxidation (NADI)}, subject = {Enzyme-linked immunosorbent assay}, language = {en} } @techreport{AlbrachtRitzmannKrameretal.2017, author = {Albracht, Kirsten and Ritzmann, Ramona and Kramer, Andreas and Meskemper, Joshua and St{\"a}udle, Benjamin and K{\"u}mmel, Jacob and Freyler, Katrin and Felsenberg, Dieter and Gruber, Marksu and Gollhofer, Albert and Belavy, Daniel L.}, title = {Vorhaben: Muskelkraftgenerierungsf{\"a}higkeit in Mikrogravitation}, publisher = {Deutsche Sporthochschule K{\"o}ln}, address = {Kl{\"o}n}, doi = {10.2314/KXP:1670327353}, pages = {23 Seiten}, year = {2017}, language = {de} } @article{BogoyavlenskiyBerezinOgnevaetal.1999, author = {Bogoyavlenskiy, Andrey P. and Berezin, Vladimir E. and Ogneva, A. V. and Tolmacheva, V. P. and Digel, Ilya and Khudyakova, S. S.}, title = {Immunostimulating activity of a saponin-containing extract of Saponaria officinalis}, series = {Voprosy virusologii}, volume = {44}, journal = {Voprosy virusologii}, number = {5}, issn = {0507-4088}, pages = {229 -- 232}, year = {1999}, language = {en} } @article{AlexyukBogoyavlenskiyAlexyuketal.2021, author = {Alexyuk, Madina and Bogoyavlenskiy, Andrey and Alexyuk, Pavel and Moldakhanov, Yergali and Berezin, Vladimir E. and Digel, Ilya}, title = {Epipelagic microbiome of the Small Aral Sea: Metagenomic structure and ecological diversity}, series = {MicrobiologyOpen}, volume = {10}, journal = {MicrobiologyOpen}, number = {1}, publisher = {Wiley}, address = {Weinheim}, issn = {2045-8827}, doi = {10.1002/mbo3.1142}, pages = {1 -- 10}, year = {2021}, abstract = {Microbial diversity studies regarding the aquatic communities that experienced or are experiencing environmental problems are essential for the comprehension of the remediation dynamics. In this pilot study, we present data on the phylogenetic and ecological structure of microorganisms from epipelagic water samples collected in the Small Aral Sea (SAS). The raw data were generated by massive parallel sequencing using the shotgun approach. As expected, most of the identified DNA sequences belonged to Terrabacteria and Actinobacteria (40\% and 37\% of the total reads, respectively). The occurrence of Deinococcus-Thermus, Armatimonadetes, Chloroflexi in the epipelagic SAS waters was less anticipated. Surprising was also the detection of sequences, which are characteristic for strict anaerobes—Ignavibacteria, hydrogen-oxidizing bacteria, and archaeal methanogenic species. We suppose that the observed very broad range of phylogenetic and ecological features displayed by the SAS reads demonstrates a more intensive mixing of water masses originating from diverse ecological niches of the Aral-Syr Darya River basin than presumed before.}, language = {en} } @inproceedings{BerretzSkorupaSanderetal.2010, author = {Berretz, Frank and Skorupa, Sascha and Sander, Volker and Belloum, Adam}, title = {Towards an actor-driven workflow management system for grids}, series = {Proceedings of 2010 International Symposium on Collaborative Technologies and Systems}, booktitle = {Proceedings of 2010 International Symposium on Collaborative Technologies and Systems}, publisher = {IEEE}, address = {Piscataway, NJ}, isbn = {978-1-4244-6619-1}, doi = {10.1109/CTS.2010.5478458}, pages = {611 -- 616}, year = {2010}, abstract = {Currently, most workflow management systems in Grid environments provide push-oriented job distribution strategies, where jobs are explicitly delegated to resources. In those scenarios the dedicated resources execute submitted jobs according to the request of a workflow engine or Grid wide scheduler. This approach has various limitations, particularly if human interactions should be integrated in workflow execution. To support human interactions with the benefit of enabling inter organizational computation and community approaches, this poster paper proposes the idea of a pull-based task distribution strategy. Here, heterogeneous resources, including human interaction, should actively select tasks for execution from a central repository. This leads to special demands regarding security issues like access control. In the established push-based job execution the resources are responsible for granting access to workflows and job initiators. In general this is done by access control lists, where users are explicitly mapped to local accounts according to their policies. In the pull-based approach the resources actively apply for job executions by sending requests to a central task repository. This means that every resource has to be able to authenticate against the repository to be authorized for task execution. In other words the authorization is relocated from the resources to the repository. The poster paper introduces current work regarding to the mentioned security aspects in the pull-based approach within the scope of the project "HiX4AGWS".}, language = {en} } @inproceedings{KirchnerSpelthahnSchoeningetal.2010, author = {Kirchner, Patrick and Spelthahn, Heiko and Sch{\"o}ning, Michael Josef and Henkel, Hartmut and Schneider, Andreas and Friedrich, Peter and Kolstad, Jens and Berger, J{\"o}rg}, title = {Realisierung eines Polyimid-basierten kalorimetrischen Gassensors zur Inline-{\"U}berwachung der H2O2-Konzentration in aseptischen Abf{\"u}llsystemen}, series = {Tagungsband: Sensoren und Messsysteme 2010}, booktitle = {Tagungsband: Sensoren und Messsysteme 2010}, publisher = {VDE Verlag}, address = {Berlin}, isbn = {978-3-8007-3260-9}, pages = {607 -- 612}, year = {2010}, abstract = {In aseptischen Abf{\"u}llsystemen wird Wasserstoffperoxid in der Gasphase aufgrund der stark oxidativen Wirkung zur Packstoffentkeimung eingesetzt. Dabei wird die Effizienz der Entkeimung im Wesentlichen von der vorliegenden H2O2-Konzentration im Packstoff bestimmt. Zur Inline-{\"U}berwachung der H2O2-Konzentration wurde ein kalorimetrischer Gassensor auf Basis einer flexiblen Polyimidfolie aus temperatursensitiven D{\"u}nnschicht-Widerst{\"a}nden und Mangan(IV)-oxid als katalytische Transducerschicht realisiert. Der Sensor weist ein lineares Ansprechverhalten mit einer Sensitivit{\"a}t von 7,15 °C/Vol.-\% in einem H2O2-Konzentrationsbereich von 0 bis 8 Vol.-\% auf. Weiterhin wurde zur Auslesung des Sensorsignals eine RFID-Elektronik, bestehend aus einem Sensor-Tag und einer Sende-/Empfangseinheit ausgelegt, sowie eine Abfolge des Messzyklus aufgestellt. Im weiteren Verlauf soll der kalorimetrische Gassensor mit der RFID-Elektronik gekoppelt und in eine Testverpackung zur Inline-{\"U}berwachung der H2O2-Konzentration in aseptischen Abf{\"u}llsystemen implementiert werden.}, language = {de} } @inproceedings{WernerSpelthahnSchoeningetal.2010, author = {Werner, Frederik and Spelthahn, Heiko and Sch{\"o}ning, Michael Josef and Krumbe, Christoph and Wagner, Torsten and Yoshinobu, Tatsuo and Keusgen, Michael}, title = {Neue Ansteuerungselektronik f{\"u}r LAPS-basierte Biosensoren zur gleichzeitig ortsaufgel{\"o}sten Messung der pH-Konzentration}, series = {Tagungsband: Sensoren und Messsysteme 2010}, booktitle = {Tagungsband: Sensoren und Messsysteme 2010}, publisher = {VDE Verlag}, address = {Berlin}, isbn = {978-3-8007-3260-9}, pages = {109 -- 114}, year = {2010}, abstract = {Ein lichtadressierbarer potentiometrischer Sensor (LAPS) kann die Konzentration eines oder mehrerer Analyten ortsaufgel{\"o}st auf der Sensoroberfl{\"a}che nachweisen. Dazu wird mit einer modulierten Lichtquelle die Halbleiterstruktur des zu untersuchenden Bereiches angeregt und ein entsprechender Photostrom ausgelesen. Durch gleichzeitige Anregung mehrere Bereiche durch Lichtquellen mit unterschiedlichen Modulationsfrequenzen k{\"o}nnen diese auch zeitgleich ausgelesen werden. Mit der neuen, hier vorgestellten Ansteuerungselektronik integriert in einem "Field Programmable Gate Array" (FPGA) ist es m{\"o}glich, mehrere Leuchtquellen gleichzeitig mit unterschiedlichen, w{\"a}hrend der Laufzeit festlegbaren Frequenzen, Phasen und Lichtintensit{\"a}ten zu betreiben. Somit kann das Frequenzverhalten des Sensors untersucht und die Konzentration des Analyten {\"u}ber das Oberfl{\"a}chenpotential mit Hilfe von Strom/Spannungs-Kurven und Phase/Spannungs-Kurven bestimmt werden.}, language = {de} } @inproceedings{PoghossianWagnerSchoening2010, author = {Poghossian, Arshak and Wagner, Holger and Sch{\"o}ning, Michael Josef}, title = {Automatisiertes „wafer level"-Testsystem zur Charakterisierung von siliziumbasierten Chemo- und Biosensoren}, series = {Tagungsband: Sensoren und Messsysteme 2010}, booktitle = {Tagungsband: Sensoren und Messsysteme 2010}, publisher = {VDE Verlag}, address = {Berlin}, isbn = {978-3-8007-3260-9}, pages = {89 -- 92}, year = {2010}, abstract = {Es wurde ein automatisiertes, computerunterst{\"u}tztes Testsystem f{\"u}r die Funktionspr{\"u}fung und Charakterisierung von (bio-)chemischen Sensoren auf Waferebene entwickelt und in einen konventionellen Spitzenmessplatz integriert. Das System erm{\"o}glicht die Charakterisierung und Identifizierung „funktionstauglicher" Sensoren bereits auf Waferebene zwischen den einzelnen Herstellungsschritten, wodurch weitere, bisher {\"u}bliche Verarbeitungsschritte wie das Fixieren, Bonden und Verkapseln f{\"u}r die defekten oder nicht funktionstauglichen Sensorstrukturen entf{\"a}llt. Außerdem bietet eine speziell entworfene miniaturisierte Durchflussmesszelle die M{\"o}glichkeit, bereits auf Waferlevel die Sensitivit{\"a}t, Drift, Hysterese und Ansprechzeit der (bio-)chemischen Sensoren zu charakterisieren. Das System wurde exemplarisch mit kapazitiven, pH-sensitiven EIS- (Elektrolyt-Isolator-Silizium) Strukturen und ISFET- (ionensensitiver Feldeffekttransistor) Strukturen mit verschiedenen Geometrien und Gate-Layouts getestet.}, language = {de} } @inproceedings{BaeckerPoghossianSchoeningetal.2010, author = {B{\"a}cker, Matthias and Poghossian, Arshak and Sch{\"o}ning, Michael Josef and Schnitzler, Thomas and Biselli, Manfred and Zang, Werner and Wagner, Patrick}, title = {Entwicklung eines modularen festk{\"o}rperbasierten Sensorsystems f{\"u}r die {\"U}berwachung von Zellkulturfermentationen}, series = {Tagungsband: Sensoren und Messsysteme 2010}, booktitle = {Tagungsband: Sensoren und Messsysteme 2010}, publisher = {VDE Verlag}, address = {Berlin}, isbn = {978-3-8007-3260-9}, pages = {688 -- 698}, year = {2010}, abstract = {In diesem Beitrag werden Ergebnisse der Entwicklung eines modularen festk{\"o}rperbasierten Sensorsystems f{\"u}r die {\"U}berwachung von Zellkulturfermentationen pr{\"a}sentiert. Zur Messung der Elektrolytleitf{\"a}higkeit wurde das Layout von Interdigitalelektroden angepasst, um in vergleichsweise gut leitenden Elektrolyten zu messen. Durch Quervernetzung von Glucose-Oxidase mit Glutaraldehyd und Immobilisierung auf einer Platinelektrode wurde ein amperometrischer Glucosesensor mit einem linearen Messbereich von bis zu 2 mM und einer Sensitivit{\"a}t von 168 nA/mM realisiert.}, language = {de} } @incollection{StaatSponagelNguyen2010, author = {Staat, Manfred and Sponagel, Stefan and Nguyen, Nhu Huynh}, title = {Experiment and material model for soft tissue materials}, series = {Constitutive models for rubber VI}, booktitle = {Constitutive models for rubber VI}, publisher = {Taylor \& Francis}, address = {London}, isbn = {9780429206597 (eBook)}, doi = {10.1201/NOE0415563277-90}, pages = {6 Seiten}, year = {2010}, abstract = {Biomechanics studies biological soft tissue materials (growth, remodeling) in vivo. For this objective, the detailed information of material properties must be well defined to construct reliable constitutive models. In the paper, the bulge test is carried out with elastomers in order to develop a test method. Then, application of the test for soft tissue materials is straightforward due to the similarities between elastomers with soft tissue materials as proved in Holzapfel 2005, Ogden 2009. It means, after the preliminary experiments and parameter identification with rubber materials has been setup, experiments on soft tissue materials can be similarly carried out. Elastomers have a complex behavior which strongly depends on the largest previous load cycle. For simplicity we consider only the first loading.}, language = {en} } @inproceedings{PhamVuTranetal.2010, author = {Pham, Phu Tinh and Vu, Khoi Duc and Tran, Thanh Ngoc and Staat, Manfred}, title = {A primal-dual algorithm for shakedown analysis of elastic-plastic bounded linearly kinematic hardening bodies}, year = {2010}, language = {en} } @inproceedings{NguyenRaatschenStaat2010, author = {Nguyen, N.-H. and Raatschen, Hans-J{\"u}rgen and Staat, Manfred}, title = {A hyperelastic model of biological tissue materials in tubular organs}, year = {2010}, language = {en} } @inproceedings{TranStaat2010, author = {Tran, Thanh Ngoc and Staat, Manfred}, title = {Shakedown analysis of two dimensional structures by an edge-based smoothed finite element method}, year = {2010}, language = {en} } @article{HerzogPietrzykShahetal.2010, author = {Herzog, Hans and Pietrzyk, Uwe and Shah, N. Jon and Ziemons, Karl}, title = {The current state, challenges and perspectives of MR-PET}, series = {Neuroimage}, volume = {49}, journal = {Neuroimage}, number = {3}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1053-8119}, doi = {10.1016/j.neuroimage.2009.10.036}, pages = {2072 -- 2082}, year = {2010}, abstract = {Following the success of PET/CT during the last decade and the recent increasing proliferation of SPECT/CT, another hybrid imaging instrument has been gaining more and more interest: MR-PET. First combined, simultaneous PET and MR studies carried out in small animals demonstrated the feasibility of the new approach. Concurrently, some prototypes of an MR-PET scanner for simultaneous human brain studies have been built, their performance is being tested and preliminary applications have already been shown. Through this pioneering work, it has become clear that advances in the detector design are necessary for further optimization. Recently, the different issues related to the present state and future prospects of MR-PET were presented and discussed during an international 2-day workshop at the Forschungszentrum J{\"u}lich, Germany, held after, and in conjunction with, the 2008 IEEE Nuclear Science Symposium and Medical Imaging Conference in Dresden, Germany on October 27-28, 2008. The topics ranged from small animal MR-PET imaging to human MR-BrainPET imaging, new detector developments, challenges/opportunities for ultra-high field MR-PET imaging and considerations of possible future research and clinical applications. This report presents a critical summary of the contributions made to the workshop.}, language = {en} } @article{KirchnerOberlaenderFriedrichetal.2010, author = {Kirchner, Patrick and Oberl{\"a}nder, Jan and Friedrich, Peter and Rysstad, Gunnar and Berger, J{\"o}rg and Keusgen, Michael and Sch{\"o}ning, Michael Josef}, title = {Realization of a calorimetric gas sensor on polyimide foil for applications in aseptic food industry}, series = {Procedia Engineering}, volume = {5}, journal = {Procedia Engineering}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1877-7058}, doi = {10.1016/j.proeng.2010.09.098}, pages = {264 -- 267}, year = {2010}, abstract = {A calorimetric gas sensor is presented for the monitoring of gas-phase H2O2 at elevated temperature during sterilization processes in aseptic food industry. The sensor consists of two temperature-sensitive thin-film resistances built up on a polyimide foil with a thickness of 25 μm, which are passivated with a layer of SU-8 photo resist and catalytically activated with manganese(IV) oxide. Instead of an active heating structure, the calorimetric sensor utilizes the elevated temperature of an evaporated H2O2 aerosol. In an experimental set-up, the sensor has shown a sensitivity of 4.78 °C/(\%v/v) in a H2O2 concentration range of 0 to 10\% v/v at an evaporation temperature of 240 ∘C. Furthermore, the sensor possesses the same, unchanged sensor signal even at varied evaporation temperatures of the gas stream. The sensor characterization demonstrates the suitability of the calorimetric gas sensor for monitoring the efficiency of sterilization processes.}, language = {en} } @article{WagnerMiyamotoSchoeningetal.2010, author = {Wagner, Torsten and Miyamoto, Ko-ichiro and Sch{\"o}ning, Michael Josef and Yoshinobu, Tatsuo}, title = {Novel combination of digital light processing (DLP) and light-addressable potentiometric sensors (LAPS) for flexible chemical imaging}, series = {Procedia Engineering}, volume = {5}, journal = {Procedia Engineering}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1877-7058}, doi = {10.1016/j.proeng.2010.09.161}, pages = {520 -- 523}, year = {2010}, abstract = {Chemical imaging systems allow the visualisation of the distribution of chemical species on the sensor surface. This work represents a new flexible approach of read out in a light-addressable potentiometric sensor (LAPS) with the help of a digital light processing (DLP) set-up. The DLP, known well for video projectors, consists of a mirror-array MEMS device which allows fast and flexible generation of light patterns. With the help of these light patterns the sensor surface of the LAPS device can be read out sequentially in a raster like scheme (scanning LAPS). The DLP approach has several advantages compared to conventional scanning LAPS set-ups, e.g., the spot size, the shape and the intensity of the light pointer can be changed easily and no mechanical movement is necessary, which reduces the size of the set-up and increases the stability and speed of measurement.}, language = {en} } @article{MiyamotoKanekoMatsuoetal.2010, author = {Miyamoto, Ko-ichiro and Kaneko, Kazumi and Matsuo, Akira and Wagner, Torsten and Kanoh, Shin`ichiro and Sch{\"o}ning, Michael Josef and Yoshinobu, Tatsuo}, title = {Miniaturized chemical imaging sensor system using an OLED display panel}, series = {Procedia Engineering}, volume = {5}, journal = {Procedia Engineering}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1877-7058}, doi = {10.1016/j.proeng.2010.09.160}, pages = {516 -- 519}, year = {2010}, abstract = {The chemical imaging sensor is a semiconductor-based chemical sensor that can visualize the two-dimensional distribution of specific ions or molecules in the solution. In this study, we developed a miniaturized chemical imaging sensor system with an OLED display panel as a light source that scans the sensor plate. In the proposed configuration, the display panel is placed directly below the sensor plate and illuminates the back surface. The measured area defined by illumination can be arbitrarily customized to fit the size and the shape of the sample to be measured. The waveform of the generated photocurrent, the currentvoltage characteristics and the pH sensitivity were investigated and pH imaging with this miniaturized system was demonstrated.}, language = {en} } @article{AbouzarPedrazaSchoeningetal.2010, author = {Abouzar, Maryam H. and Pedraza, A. M. and Sch{\"o}ning, Michael Josef and Poghossian, Arshak}, title = {Label-free DNA hybridization and denaturation detection by means of field-effect nanoplate SOI capacitors functionalized with gold nanoparticles}, series = {Procedia Engineering}, volume = {5}, journal = {Procedia Engineering}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1877-7058}, doi = {10.1016/j.proeng.2010.09.259}, pages = {918 -- 921}, year = {2010}, abstract = {A new approach for a label-free electrical detection of DNA hybridization and denaturation using an array of individually addressable field-effect nanoplate SOI (silicon-on-insulator) capacitors functionalized with gold nanoparticles is presented. By using a constant-capacitance measuring setup in a differential mode, signal changes of ∼110 mV and ∼70 mV have been registered after the DNA hybridization and denaturation events, respectively.}, language = {en} }