TY - JOUR A1 - Sanchez-Cespedes, Lina Maria A1 - Leasure, Douglas Ryan A1 - Tejedor-Garavito, Natalia A1 - Amaya Cruz, Glenn Harry A1 - Garcia Velez, Gustavo Adolfo A1 - Mendoza Beltrán, Andryu Enrique A1 - Marín-Salazar, Yenny Andrea A1 - Esch, Thomas A1 - Tatem, Andrew J. A1 - Ospina Bohórquez, Mariana Francisca T1 - Social cartography and satellite-derived building coverage for post-census population estimates in difficult-to-access regions of Colombia JF - Population studies : a Journal of Demography N2 - Effective government services rely on accurate population numbers to allocate resources. In Colombia and globally, census enumeration is challenging in remote regions and where armed conflict is occurring. During census preparations, the Colombian National Administrative Department of Statistics conducted social cartography workshops, where community representatives estimated numbers of dwellings and people throughout their regions. We repurposed this information, combining it with remotely sensed buildings data and other geospatial data. To estimate building counts and population sizes, we developed hierarchical Bayesian models, trained using nearby full-coverage census enumerations and assessed using 10-fold cross-validation. We compared models to assess the relative contributions of community knowledge, remotely sensed buildings, and their combination to model fit. The Community model was unbiased but imprecise; the Satellite model was more precise but biased; and the Combination model was best for overall accuracy. Results reaffirmed the power of remotely sensed buildings data for population estimation and highlighted the value of incorporating local knowledge. KW - modelled population estimates KW - population and housing census KW - GIS KW - remote sensing KW - Bayesian statistics Y1 - 2023 U6 - https://doi.org/10.1080/00324728.2023.2190151 SN - 1477-4747 VL - 78 IS - 1 SP - 3 EP - 20 PB - Taylor & Francis CY - London ER - TY - JOUR A1 - Varriale, Ludovica A1 - Hengsbach, Jan-Niklas A1 - Guo, Tianyi A1 - Kuka, Katrin A1 - Tippkötter, Nils A1 - Ulber, Roland T1 - Sustainable production of lactic acid using a perennial ryegrass as feedstock—a comparative study of fermentation at the bench- and reactor-scale, and ensiling JF - Sustainability N2 - Perennial ryegrass (Lolium perenne) is an underutilized lignocellulosic biomass that has several benefits such as high availability, renewability, and biomass yield. The grass press-juice obtained from the mechanical pretreatment can be used for the bio-based production of chemicals. Lactic acid is a platform chemical that has attracted consideration due to its broad area of applications. For this reason, the more sustainable production of lactic acid is expected to increase. In this work, lactic acid was produced using complex medium at the bench- and reactor scale, and the results were compared to those obtained using an optimized press-juice medium. Bench-scale fermentations were carried out in a pH-control system and lactic acid production reached approximately 21.84 ± 0.95 g/L in complex medium, and 26.61 ± 1.2 g/L in press-juice medium. In the bioreactor, the production yield was 0.91 ± 0.07 g/g, corresponding to a 1.4-fold increase with respect to the complex medium with fructose. As a comparison to the traditional ensiling process, the ensiling of whole grass fractions of different varieties harvested in summer and autumn was performed. Ensiling showed variations in lactic acid yields, with a yield up to 15.2% dry mass for the late-harvested samples, surpassing typical silage yields of 6–10% dry mass. KW - lactobacillus KW - lactic acid KW - ensiling KW - fermentation KW - perennial ryegrass KW - renewable resources KW - bio-based economy Y1 - 2024 U6 - https://doi.org/10.3390/su16188054 SN - 2071-1050 N1 - This article belongs to the Section "Environmental Sustainability and Applications" VL - 16 IS - 18 PB - MDPI CY - Basel ER - TY - JOUR A1 - Ortner, Marion A1 - Hauser, Christine A1 - Schmaderer, Christoph A1 - Muggenthaler, Claudia A1 - Hapfelmeier, Alexander A1 - Sorg, Christian A1 - Diehl-Schmid, Janine A1 - Kurz, Alexander A1 - Förstl, Hans A1 - Ikenberg, Benno A1 - Kotliar, Konstantin A1 - Holger, Poppert A1 - Grimmer, Timo T1 - Decreased vascular pulsatility in Alzheimer’s disease dementia measured by transcranial color-coded duplex sonography JF - Neuropsychiatric disease and treatment N2 - Purpose: Impaired paravascular drainage of β-Amyloid (Aβ) has been proposed as a contributing cause for sporadic Alzheimer’s disease (AD), as decreased cerebral blood vessel pulsatility and subsequently reduced propulsion in this pathway could lead to the accumulation and deposition of Aβ in the brain. Therefore, we hypothesized that there is an increased impairment in pulsatility across AD spectrum. Patients and Methods: Using transcranial color-coded duplex sonography (TCCS) the resistance and pulsatility index (RI; PI) of the middle cerebral artery (MCA) in healthy controls (HC, n=14) and patients with AD dementia (ADD, n=12) were measured. In a second step, we extended the sample by adding patients with mild cognitive impairment (MCI) stratified by the presence (MCI-AD, n=8) or absence of biomarkers (MCI-nonAD, n=8) indicative for underlying AD pathology, and compared RI and PI across the groups. To control for atherosclerosis as a confounder, we measured the arteriolar-venular-ratio of retinal vessels. Results: Left and right RI (p=0.020; p=0.027) and left PI (p=0.034) differed between HC and ADD controlled for atherosclerosis with AUCs of 0.776, 0.763, and 0.718, respectively. The RI and PI of MCI-AD tended towards ADD, of MCI-nonAD towards HC, respectively. RIs and PIs were associated with disease severity (p=0.010, p=0.023). Conclusion: Our results strengthen the hypothesis that impaired pulsatility could cause impaired amyloid clearance from the brain and thereby might contribute to the development of AD. However, further studies considering other factors possibly influencing amyloid clearance as well as larger sample sizes are needed. Y1 - 2019 U6 - https://doi.org/10.2147/NDT.S225754 SN - 1178-2021 IS - 15 SP - 3487 EP - 3499 PB - Dove Medical Press CY - Albany, Auckland ER - TY - JOUR A1 - Bandlitz, Stefan A1 - Nakhoul, Makram A1 - Kotliar, Konstantin T1 - Daily variations of corneal white-to-white diameter measured with different methods JF - Clinical and experimental optometry N2 - Purpose: A precise determination of the corneal diameter is essential for the diagnosis of various ocular diseases, cataract and refractive surgery as well as for the selection and fitting of contact lenses. The aim of this study was to investigate the agreement between two automatic and one manual method for corneal diameter determination and to evaluate possible diurnal variations in corneal diameter. Patients and Methods: Horizontal white-to-white corneal diameter of 20 volunteers was measured at three different fixed times of a day with three methods: Scheimpflug method (Pentacam HR, Oculus), placido based topography (Keratograph 5M, Oculus) and manual method using an image analysis software at a slitlamp (BQ900, Haag-Streit). Results: The two-factorial analysis of variance could not show a significant effect of the different instruments (p = 0.117), the different time points (p = 0.506) and the interaction between instrument and time point (p = 0.182). Very good repeatability (intraclass correlation coefficient ICC, quartile coefficient of dispersion QCD) was found for all three devices. However, manual slitlamp measurements showed a higher QCD than the automatic measurements with the Keratograph 5M and the Pentacam HR at all measurement times. Conclusion: The manual and automated methods used in the study to determine corneal diameter showed good agreement and repeatability. No significant diurnal variations of corneal diameter were observed during the period of time studied. Y1 - 2022 U6 - https://doi.org/10.2147/OPTO.S360651 SN - 0816-4622 IS - 14 SP - 173 EP - 181 PB - Taylor & Francis CY - London ER - TY - JOUR A1 - Knödler, Matthias A1 - Rühl, Clemens A1 - Emonts, Jessica A1 - Buyel, Johannes Felix T1 - Seasonal weather changes affect the yield and quality of recombinant proteins produced in transgenic tobacco plants in a greenhouse setting JF - Frontiers in Plant Science N2 - Transgenic plants have the potential to produce recombinant proteins on an agricultural scale, with yields of several tons per year. The cost-effectiveness of transgenic plants increases if simple cultivation facilities such as greenhouses can be used for production. In such a setting, we expressed a novel affinity ligand based on the fluorescent protein DsRed, which we used as a carrier for the linear epitope ELDKWA from the HIV-neutralizing antibody 2F5. The DsRed-2F5-epitope (DFE) fusion protein was produced in 12 consecutive batches of transgenic tobacco (Nicotiana tabacum) plants over the course of 2 years and was purified using a combination of blanching and immobilized metal-ion affinity chromatography (IMAC). The average purity after IMAC was 57 ± 26% (n = 24) in terms of total soluble protein, but the average yield of pure DFE (12 mg kg−1) showed substantial variation (± 97 mg kg−1, n = 24) which correlated with seasonal changes. Specifically, we found that temperature peaks (>28°C) and intense illuminance (>45 klx h−1) were associated with lower DFE yields after purification, reflecting the loss of the epitope-containing C-terminus in up to 90% of the product. Whereas the weather factors were of limited use to predict product yields of individual harvests conducted for each batch (spaced by 1 week), the average batch yields were well approximated by simple linear regression models using two independent variables for prediction (illuminance and plant age). Interestingly, accumulation levels determined by fluorescence analysis were not affected by weather conditions but positively correlated with plant age, suggesting that the product was still expressed at high levels, but the extreme conditions affected its stability, albeit still preserving the fluorophore function. The efficient production of intact recombinant proteins in plants may therefore require adequate climate control and shading in greenhouses or even cultivation in fully controlled indoor farms. KW - batch reproducibility KW - environmental correlation KW - fluorescent protein carrier KW - greenhouse cultivation KW - plant molecular farming Y1 - 2019 U6 - https://doi.org/10.3389/fpls.2019.01245 SN - 1664-462X (online-ressource) IS - 10 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Bernau, C. R. A1 - Knödler, Matthias A1 - Emonts, Jessica A1 - Jäpel, Ronald Colin A1 - Buyel, Johannes Felix T1 - The use of predictive models to develop chromatography-based purification processes JF - Frontiers in Bioengineering and Biotechnology N2 - Chromatography is the workhorse of biopharmaceutical downstream processing because it can selectively enrich a target product while removing impurities from complex feed streams. This is achieved by exploiting differences in molecular properties, such as size, charge and hydrophobicity (alone or in different combinations). Accordingly, many parameters must be tested during process development in order to maximize product purity and recovery, including resin and ligand types, conductivity, pH, gradient profiles, and the sequence of separation operations. The number of possible experimental conditions quickly becomes unmanageable. Although the range of suitable conditions can be narrowed based on experience, the time and cost of the work remain high even when using high-throughput laboratory automation. In contrast, chromatography modeling using inexpensive, parallelized computer hardware can provide expert knowledge, predicting conditions that achieve high purity and efficient recovery. The prediction of suitable conditions in silico reduces the number of empirical tests required and provides in-depth process understanding, which is recommended by regulatory authorities. In this article, we discuss the benefits and specific challenges of chromatography modeling. We describe the experimental characterization of chromatography devices and settings prior to modeling, such as the determination of column porosity. We also consider the challenges that must be overcome when models are set up and calibrated, including the cross-validation and verification of data-driven and hybrid (combined data-driven and mechanistic) models. This review will therefore support researchers intending to establish a chromatography modeling workflow in their laboratory. KW - biopharmaceutical production process KW - Data-driven models KW - downstream processing design KW - experiment quality KW - hybrid model validation Y1 - 2022 U6 - https://doi.org/10.3389/fbioe.2022.1009102 SN - 2296-4185 (online-ressource) IS - 10 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Emonts, Jessica A1 - Buyel, Johannes Felix T1 - An overview of descriptors to capture protein properties – Tools and perspectives in the context of QSAR modeling JF - Computational and Structural Biotechnology Journal N2 - Proteins are important ingredients in food and feed, they are the active components of many pharmaceutical products, and they are necessary, in the form of enzymes, for the success of many technical processes. However, production can be challenging, especially when using heterologous host cells such as bacteria to express and assemble recombinant mammalian proteins. The manufacturability of proteins can be hindered by low solubility, a tendency to aggregate, or inefficient purification. Tools such as in silico protein engineering and models that predict separation criteria can overcome these issues but usually require the complex shape and surface properties of proteins to be represented by a small number of quantitative numeric values known as descriptors, as similarly used to capture the features of small molecules. Here, we review the current status of protein descriptors, especially for application in quantitative structure activity relationship (QSAR) models. First, we describe the complexity of proteins and the properties that descriptors must accommodate. Then we introduce descriptors of shape and surface properties that quantify the global and local features of proteins. Finally, we highlight the current limitations of protein descriptors and propose strategies for the derivation of novel protein descriptors that are more informative. KW - Prediction of molecular features KW - Protein structure complexity KW - Quantitative structure activity relationship KW - Scalar parameters KW - Shape and surface properties Y1 - 2023 U6 - https://doi.org/10.1016/j.csbj.2023.05.022 SN - 2001-0370 (online-ressource) IS - 21 SP - 3234 EP - 3247 PB - Research Network of Computational and Structural Biotechnology CY - Gotenburg ER - TY - JOUR A1 - Riepl, Herbert Matthias A1 - Pettrak, Jürgen A1 - Faulstich, Martin A1 - Herrmann, Wolfgang Anton T1 - Self metathesis of fatty alcohols and amines to provide monomers for polyester and polyamide products JF - Macromolecular Symposia N2 - Self metathesis of oleochemicals offers a variety of bifunctional compounds, that can be used as monomer for polymer production. Many precursors are in huge scales available, like oleic acid ester (biodiesel), oleyl alcohol (tensides), oleyl amines (tensides, lubricants). We show several ways to produce and separate and purify C18-α,ω-bifunctional compounds, using Grubbs 2nd Generation catalysts, starting from technical grade educts. KW - fatty acid KW - metathesis KW - polyamide KW - polyester KW - renewable resources Y1 - 2010 U6 - https://doi.org/10.1002/masy.200900041 SN - 1521-3900 (eISSN) SN - 0258-0322 SN - 1022-1360 N1 - Special Issue: "Olefin Metathesis" VL - 293 IS - 1 SP - 39 EP - 42 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Großhauser, Christian A1 - Pettrak, Jürgen T1 - Die Rolle des Wasserstoffs in der Abwasserbehandlung JF - Wasser und Abfall N2 - Die Bereitstellung von nachhaltig erzeugtem Wasserstoff als Energieträger und Rohstoff ist eine wichtige Schlüsseltechnologie sowohl als Ersatz für fossile Energieträger, aber auch als Produkt im Zusammenhang mit Kreislaufprozessen. In der Abwasserbehandlung bestehen verschiedene Möglichkeiten Wasserstoff herzustellen. Mehrere Wege, mögliche Synergien, aber auch deren Nachteile werden vorgestellt. Y1 - 2023 U6 - https://doi.org/10.1007/s35152-023-1444-4 SN - 1436-9095 SN - 2192-8754 (eISSN) IS - 7/8 PB - Springer Fachmedien CY - Wiesbaden ER - TY - JOUR A1 - Rake, Heinrich A1 - Enning, Manfred A1 - Kurth, Johannes A1 - Schröder, Walter T1 - Automatic uncoupler completes automation at the hump JF - RGI - Railway Gazette International Y1 - 1994 SN - 0373-5346 VL - 150 IS - 6 SP - 371 EP - 374 PB - Reed Business CY - Sutton ER - TY - JOUR A1 - Rake, Heinrich A1 - Schwanhäußer, Wulf A1 - Frederich, Fritz A1 - Enning, Manfred T1 - Automatisierung von Ablaufanlagen mit dem Kupplungsroboter JF - ETR - Eisenbahntechnische Rundschau Y1 - 1993 SN - 0013-2845 IS - 4 SP - 249 EP - 254 PB - DVV Media Group CY - Hamburg ER - TY - JOUR A1 - Manfred, Enning A1 - May, Jörg A1 - Sutter, Stefan T1 - Innovation am Güterwagen am Beispiel der Automatischen Bremsprobe JF - ETR - Eisenbahntechnische Rundschau N2 - Mit der Digitalen Automatischen Kupplung beginnt ein neues Kapitel des Schienengüterverkehrs, in dem zusammengestellte Wagen sich automatisch in wenigen Minuten abfahrbereit machen, ohne dass der Mensch eingreifen muss. Eines des größten Hemmnisse der umweltfreundlichen Schiene wird dann entfallen. Notwendig ist jetzt eine Diskussion über den Umfang und die Systemgrenzen der Automatischen Bremsprobe. Y1 - 2020 SN - 0013-2845 IS - 12 SP - 14 EP - 19 PB - DVV Media Group CY - Hamburg ER - TY - JOUR A1 - Enning, Manfred A1 - Schmidt, Bernd A1 - Wilbring, Daniela T1 - Auf dem Weg zur autonomen Anschlussbedienung JF - Privatbahn-Magazin Y1 - 2019 SN - 1865-0163 IS - 3 SP - 40 EP - 43 PB - Bahn Media CY - Suhlendorf ER - TY - JOUR A1 - Enning, Manfred A1 - Pfaff, Raphael T1 - Güterwagen 4.0 - Mehr als nur technischer Fortschritt JF - Privatbahn-Magazin N2 - Lokomotiven sind dank modernster Konzepte der Antriebstechnik heute energiesparend und umweltfreundlich. Eine Ausrüstung mit Telematik und Assistenzfunktionen ist Standard. Auf der Strecke zeigt sich moderne Technik in Form elektronischer Stellwerke und Zugsicherungssysteme und in Rangier- und Abstellanlagen als EOW-Technik. Am Güterwagen hingegen ist der technische Fortschritt komplett vorbeigegangen. Auch beim modernsten Wagen (Abb. 1) ist die einzige „Automatik“-Funktion die zentral über die Hauptluftleitung (HL) versorgte und betätigte Luftbremse. Y1 - 2017 SN - 1865-0163 IS - 2 SP - 21 EP - 25 PB - Bahn Media CY - Suhlendorf ER - TY - JOUR A1 - Enning, Manfred A1 - Pfaff, Raphael T1 - Digitalisierung bringt mehr Güter auf die Schiene JF - Sonderprojekte ATM/MTZ Y1 - 2016 U6 - https://doi.org/10.1007/s41491-016-0570-7 SN - 2509-4610 VL - 21 IS - 6 (suppl.) SP - 34 EP - 37 PB - Springer Fachmedien CY - Wiesbaden ER - TY - JOUR A1 - Asar, Hande A1 - Stapenhorst, Carolin T1 - Zvi Hecker: Drawing on drawing JF - Archives of Design Research N2 - Background: Architectural representation, nurtured by the interaction between design thinking and design action, is inherently multi-layered. However, the representation object cannot always reflect these layers. Therefore, it is claimed that these reflections and layerings can gain visibility through ‘performativity in personal knowledge’, which basically has a performative character. The specific layers of representation produced during the performativity in personal knowledge permit insights about the ‘personal way of designing’ [1]. Therefore, the question, ‘how can these layered drawings be decomposed to understand the personal way of designing’, can be defined as the beginning of the study. On the other hand, performativity in personal knowledge in architectural design is handled through the relationship between explicit and tacit knowledge and representational and non-representational theory. To discuss the practical dimension of these theoretical relations, Zvi Hecker's drawing of the Heinz-Galinski-School is examined as an example. The study aims to understand the relationships between the layers by decomposing a layered drawing analytically in order to exemplify personal ways of designing. Methods: The study is based on qualitative research methodologies. First, a model has been formed through theoretical readings to discuss the performativity in personal knowledge. This model is used to understand the layered representations and to research the personal way of designing. Thus, one drawing of Hecker’s Heinz-Galinski-School project is chosen. Second, its layers are decomposed to detect and analyze diverse objects, which hint to different types of design tools and their application. Third, Zvi Hecker’s statements of the design process are explained through the interview data [2] and other sources. The obtained data are compared with each other. Results: By decomposing the drawing, eleven layers are defined. These layers are used to understand the relation between the design idea and its representation. They can also be thought of as a reading system. In other words, a method to discuss Hecker’s performativity in personal knowledge is developed. Furthermore, the layers and their interconnections are described in relation to Zvi Hecker’s personal way of designing. Conclusions: It can be said that layered representations, which are associated with the multilayered structure of performativity in personal knowledge, form the personal way of designing. KW - performativity in personal knowledge KW - personal way of designing KW - architectural layered representation KW - architectural design Y1 - 2020 U6 - https://doi.org/10.15187/adr.2020.08.33.3.45 SN - 1226-8046 SN - 2288-2987 (eISSN) VL - 33 IS - 3 SP - 45 EP - 53 PB - Korean Society of Design Science CY - Seongnam ER - TY - JOUR A1 - Stapenhorst, Carolin A1 - Zabek, Magdalena A1 - Hildebrand, Linda T1 - Communication process and information flow in the architectural planning context JF - Creativity game : theory and practice of spatial planning N2 - Against the background of growing data in everyday life, data processing tools become more powerful to deal with the increasing complexity in building design. The architectural planning process is offered a variety of new instruments to design, plan and communicate planning decisions. Ideally the access to information serves to secure and document the quality of the building and in the worst case, the increased data absorbs time by collection and processing without any benefit for the building and its user. Process models can illustrate the impact of information on the design- and planning process so that architect and planner can steer the process. This paper provides historic and contemporary models to visualize the architectural planning process and introduces means to describe today’s situation consisting of stakeholders, events and instruments. It explains conceptions during Renaissance in contrast to models used in the second half of the 20th century. Contemporary models are discussed regarding their value against the background of increasing computation in the building process. KW - Planning process KW - Manifestations KW - Tools KW - Conditions KW - Actors KW - Structure and Stages KW - Design process Y1 - 2018 U6 - https://doi.org/10.15292/IU-CG.2018.06.066-073 IS - 6 SP - 66 EP - 73 PB - University of Ljubljana CY - Ljubljana ER - TY - JOUR A1 - Stapenhorst, Carolin A1 - Motta, Luciano T1 - Città Olivettiana in Ivrea, Italien JF - Bauwelt Y1 - 2018 SN - 0005-6855 VL - 109 IS - 22 SP - 20 EP - 31 PB - Bauverlag BV CY - Gütersloh ER - TY - JOUR A1 - Stapenhorst, Carolin A1 - Dutto, Andrea Alberto T1 - Notes on conceptual learning in architecture JF - Cartha - The Form of Form Y1 - 2016 N1 - Auch enthalten in der Buchausgabe "CARTHA – On the Form of Form", ISBN 978-3-03860-070-1, Park Books, 2019 CY - Basel ER - TY - JOUR A1 - Kohl, Philipp A1 - Krämer, Yoka A1 - Fohry, Claudia A1 - Kraft, Bodo ED - Fred, Ana ED - Hadjali, Allel ED - Gusikhin, Oleg ED - Sansone, Carlo T1 - Scoping review of active learning strategies and their evaluation environments for entity recognition tasks JF - Deep learning theory and applications N2 - We conducted a scoping review for active learning in the domain of natural language processing (NLP), which we summarize in accordance with the PRISMA-ScR guidelines as follows: Objective: Identify active learning strategies that were proposed for entity recognition and their evaluation environments (datasets, metrics, hardware, execution time). Design: We used Scopus and ACM as our search engines. We compared the results with two literature surveys to assess the search quality. We included peer-reviewed English publications introducing or comparing active learning strategies for entity recognition. Results: We analyzed 62 relevant papers and identified 106 active learning strategies. We grouped them into three categories: exploitation-based (60x), exploration-based (14x), and hybrid strategies (32x). We found that all studies used the F1-score as an evaluation metric. Information about hardware (6x) and execution time (13x) was only occasionally included. The 62 papers used 57 different datasets to evaluate their respective strategies. Most datasets contained newspaper articles or biomedical/medical data. Our analysis revealed that 26 out of 57 datasets are publicly accessible. Conclusion: Numerous active learning strategies have been identified, along with significant open questions that still need to be addressed. Researchers and practitioners face difficulties when making data-driven decisions about which active learning strategy to adopt. Conducting comprehensive empirical comparisons using the evaluation environment proposed in this study could help establish best practices in the domain. Y1 - 2024 SN - 978-3-031-66694-0 (online ISBN) SN - 978-3-031-66693-3 (print ISBN) U6 - https://doi.org/10.1007/978-3-031-66694-0_6 SP - 84 EP - 106 PB - Springer CY - Cham ER -