TY - JOUR A1 - Almajhdi, Fahad N. A1 - Senger, Tilo A1 - Amer, Haitham M. A1 - Gissmann, Lutz A1 - Öhlschläger, Peter T1 - Design of a highly effective therapeutic HPV16 E6/E7-specific DNA vaccine: optimization by different ways of sequence rearrangements (Shuffling) JF - PLOS one N2 - Persistent infection with the high-risk Human Papillomavirus type 16 (HPV 16) is the causative event for the development of cervical cancer and other malignant tumors of the anogenital tract and of the head and neck. Despite many attempts to develop therapeutic vaccines no candidate has entered late clinical trials. An interesting approach is a DNA based vaccine encompassing the nucleotide sequence of the E6 and E7 viral oncoproteins. Because both proteins are consistently expressed in HPV infected cells they represent excellent targets for immune therapy. Here we report the development of 8 DNA vaccine candidates consisting of differently rearranged HPV-16 E6 and E7 sequences within one molecule providing all naturally occurring epitopes but supposedly lacking transforming activity. The HPV sequences were fused to the J-domain and the SV40 enhancer in order to increase immune responses. We demonstrate that one out of the 8 vaccine candidates induces very strong cellular E6- and E7- specific cellular immune responses in mice and, as shown in regression experiments, efficiently controls growth of HPV 16 positive syngeneic tumors. This data demonstrates the potential of this vaccine candidate to control persistent HPV 16 infection that may lead to malignant disease. It also suggests that different sequence rearrangements influence the immunogenecity by an as yet unknown mechanism. Y1 - 2014 U6 - https://doi.org/10.1371/journal.pone.0113461 SN - 1932-6203 VL - 11 IS - 9 PB - PLOS CY - San Francisco ER - TY - JOUR A1 - Allefeld, Carsten A1 - Bialonski, Stephan T1 - Detecting synchronization clusters in multivariate time series via coarse-graining of Markov chains JF - Physical Review E Y1 - 2007 U6 - https://doi.org/10.1103/PhysRevE.76.066207 SN - 2470-0053 VL - 76 IS - 6 SP - 066207 ER - TY - JOUR A1 - Aliazizi, Fereshteh A1 - Özsoylu, Dua A1 - Bakhshi Sichani, Soroush A1 - Khorshid, Mehran A1 - Glorieux, Christ A1 - Robbens, Johan A1 - Schöning, Michael Josef A1 - Wagner, Patrick T1 - Development and Calibration of a Microfluidic, Chip-Based Sensor System for Monitoring the Physical Properties of Water Samples in Aquacultures JF - Micromachines N2 - In this work, we present a compact, bifunctional chip-based sensor setup that measures the temperature and electrical conductivity of water samples, including specimens from rivers and channels, aquaculture, and the Atlantic Ocean. For conductivity measurements, we utilize the impedance amplitude recorded via interdigitated electrode structures at a single triggering frequency. The results are well in line with data obtained using a calibrated reference instrument. The new setup holds for conductivity values spanning almost two orders of magnitude (river versus ocean water) without the need for equivalent circuit modelling. Temperature measurements were performed in four-point geometry with an on-chip platinum RTD (resistance temperature detector) in the temperature range between 2 °C and 40 °C, showing no hysteresis effects between warming and cooling cycles. Although the meander was not shielded against the liquid, the temperature calibration provided equivalent results to low conductive Milli-Q and highly conductive ocean water. The sensor is therefore suitable for inline and online monitoring purposes in recirculating aquaculture systems. KW - chip-based sensor setup KW - aquaculture KW - microfluidics KW - impedance spectroscopy KW - thermometry KW - electrical conductivity of liquids Y1 - 2024 U6 - https://doi.org/10.3390/mi15060755 SN - 2072-666X N1 - This article belongs to the Special Issue "Multisensor Arrays" N1 - Corresponding author: Michael J. Schöning VL - 15 IS - 6 PB - MDPI CY - Basel ER - TY - JOUR A1 - Alhwarin, Faraj A1 - Ferrein, Alexander A1 - Scholl, Ingrid T1 - IR stereo kinect: improving depth images by combining structured light with IR stereo Y1 - 2014 SP - 1 EP - 9 ER - TY - JOUR A1 - Alexyuk, Madina A1 - Bogoyavlenskiy, Andrey A1 - Alexyuk, Pavel A1 - Moldakhanov, Yergali A1 - Berezin, Vladimir A1 - Digel, Ilya T1 - Epipelagic microbiome of the Small Aral Sea: Metagenomic structure and ecological diversity JF - MicrobiologyOpen N2 - Microbial diversity studies regarding the aquatic communities that experienced or are experiencing environmental problems are essential for the comprehension of the remediation dynamics. In this pilot study, we present data on the phylogenetic and ecological structure of microorganisms from epipelagic water samples collected in the Small Aral Sea (SAS). The raw data were generated by massive parallel sequencing using the shotgun approach. As expected, most of the identified DNA sequences belonged to Terrabacteria and Actinobacteria (40% and 37% of the total reads, respectively). The occurrence of Deinococcus-Thermus, Armatimonadetes, Chloroflexi in the epipelagic SAS waters was less anticipated. Surprising was also the detection of sequences, which are characteristic for strict anaerobes—Ignavibacteria, hydrogen-oxidizing bacteria, and archaeal methanogenic species. We suppose that the observed very broad range of phylogenetic and ecological features displayed by the SAS reads demonstrates a more intensive mixing of water masses originating from diverse ecological niches of the Aral-Syr Darya River basin than presumed before. KW - ecological structure KW - metagenomics KW - microbial diversity KW - shotgun sequencing KW - Small Aral Sea Y1 - 2021 U6 - https://doi.org/10.1002/mbo3.1142 SN - 2045-8827 N1 - Corresponding author: Ilya Digel VL - 10 IS - 1 SP - 1 EP - 10 PB - Wiley CY - Weinheim ER - TY - JOUR A1 - Alexopoulos, Spiros A1 - Hoffschmidt, Bernhard T1 - Solar tower power plant in Germany and future perspectives of the development of the technology in Greece and Cyprus JF - Renewable Energy . 35 (2010), H. 7 Y1 - 2010 SN - 0960-1481 SP - 1352 EP - 1356 ER - TY - JOUR A1 - Alexopoulos, Spiros A1 - Hoffschmidt, Bernhard T1 - Advances in solar tower technology JF - Wiley interdisciplinary reviews : Energy and Environment : WIREs Y1 - 2017 U6 - https://doi.org/10.1002/wene.217 SN - 2041-840X VL - 6 IS - 1 SP - 1 EP - 19 PB - Wiley CY - Weinheim ER - TY - JOUR A1 - Alexopoulos, Spiros A1 - Hoffschmidt, Bernhard T1 - Solarthermische Kraftwerke mit thermischen Speichern JF - Chemie Ingenieur Technik. 82 (2010), H. 9 Y1 - 2010 SN - 1522-2640 N1 - Special Issue: ProcessNet-Jahrestagung 2010 und 28. Jahrestagung der Biotechnologen V9.01 [Abstract des Vortrags] SP - 1606 EP - 1606 ER - TY - JOUR A1 - Alexopoulos, Spiros A1 - Breitbach, Gerd A1 - Hoffschmidt, Bernhard A1 - Stobbe, P. T1 - Optimization of the geometry of porous SiC ceramic filtering modules using numerical methods JF - Developments in porous, biological and geopolymer ceramics : a collection of papers presented at the 31st International Conference on Advanced Ceramics and Composites, January 21 - 26, 2007, Daytona Beach, Florida ; [papers presented at the Symposium on Porous Ceramics: Novel Developments and Applications] / ed.: Manuel Brito ... Vol. ed.: Jonathan Salem ... The American Ceramics Society Y1 - 2008 SN - 9780470196403 N1 - Ceramic engineering and science proceedings ; 28,9 SP - 95 EP - 104 PB - Wiley CY - Hoboken, NJ ER - TY - JOUR A1 - Alexopoulos, Spiros A1 - Breitbach, Gerd A1 - Hoffschmidt, Bernhard A1 - Stobbe, P. T1 - Computational fluid flow of porous resic ceramic filtering modules and optimization of the channel edge form geometry JF - Proceedings : April 14 - 18, 2008, Leipzig, Germany / hosted by VDI, Society for Chemical and Process Engineering . Vol 2 Y1 - 2008 N1 - Verein Deutscher Ingenieure ; World Filtration Congress ; (10 : ; 2008.04.14-18 : ; Leipzig) ; WFC ; (10 : ; 2008.04.14-18 : ; Leipzig) SP - 300 EP - 304 PB - Filtech Exhibitions CY - Meerbusch ER -