TY - JOUR A1 - Albanna, Walid A1 - Conzen, Catharina A1 - Weiss, Miriam A1 - Clusmann, Hans A1 - Fuest, Matthias A1 - Mueller, Marguerite A1 - Brockmann, Marc Alexander A1 - Vilser, Walthard A1 - Schmidt-Trucksäss, Arno A1 - Hoellig, Anke A1 - Seiz, Marcel A1 - Thomé, Claudius A1 - Kotliar, Konstantin A1 - Schubert, Gerrit Alexander T1 - Retinal Vessel Analysis (RVA) in the context of subarachnoid hemorrhage: A proof of concept study JF - PLoS ONE N2 - Background Timely detection of impending delayed cerebral ischemia after subarachnoid hemorrhage (SAH) is essential to improve outcome, but poses a diagnostic challenge. Retinal vessels as an embryological part of the intracranial vasculature are easily accessible for analysis and may hold the key to a new and non-invasive monitoring technique. This investigation aims to determine the feasibility of standardized retinal vessel analysis (RVA) in the context of SAH. Methods In a prospective pilot study, we performed RVA in six patients awake and cooperative with SAH in the acute phase (day 2–14) and eight patients at the time of follow-up (mean 4.6±1.7months after SAH), and included 33 age-matched healthy controls. Data was acquired using a manoeuvrable Dynamic Vessel Analyzer (Imedos Systems UG, Jena) for examination of retinal vessel dimension and neurovascular coupling. Results Image quality was satisfactory in the majority of cases (93.3%). In the acute phase after SAH, retinal arteries were significantly dilated when compared to the control group (124.2±4.3MU vs 110.9±11.4MU, p<0.01), a difference that persisted to a lesser extent in the later stage of the disease (122.7±17.2MU, p<0.05). Testing for neurovascular coupling showed a trend towards impaired primary vasodilation and secondary vasoconstriction (p = 0.08, p = 0.09 resp.) initially and partial recovery at the time of follow-up, indicating a relative improvement in a time-dependent fashion. Conclusion RVA is technically feasible in patients with SAH and can detect fluctuations in vessel diameter and autoregulation even in less severely affected patients. Preliminary data suggests potential for RVA as a new and non-invasive tool for advanced SAH monitoring, but clinical relevance and prognostic value will have to be determined in a larger cohort. Y1 - 2016 U6 - https://doi.org/10.1371/journal.pone.0158781 SN - 1932-6203 VL - 11 IS - 7 PB - PLOS CY - San Francisco ER - TY - JOUR A1 - Bialonski, Stephan A1 - Allefeld, Carsten A1 - Wellmer, Jörg A1 - Elger, Christian E. A1 - Lehnertz, Klaus T1 - An approach to identify synchronization clusters within the epileptic network JF - Klinische Neurophysiologie Y1 - 2008 U6 - https://doi.org/10.1055/s-2008-1072881 VL - 39 IS - 1 SP - A79 ER - TY - CHAP A1 - Burgazzi, Luciano A1 - Fiorini, Gian Luigi A1 - De Magistris, F. A1 - Lensa, Werner von A1 - Staat, Manfred A1 - Atles, J. T1 - Reliability Assessment of Passive Safety Systems T2 - Proceedings of the 6th International Conference on Nuclear Engineering : ICONE : May 10 - 14, 1998, San Diego, Calif. Y1 - 1998 N1 - CD-ROM PB - American Society of Mechanical Engineers CY - New York ER - TY - JOUR A1 - Grinsven, Bart van A1 - Vanden Bon, Natalie A1 - Grieten, Lars A1 - Murib, Mohammed Sharif A1 - Janssen, Stoffel Dominique A1 - Haenen, Ken A1 - Schneider, E. A1 - Ingebrandt, Sven A1 - Schöning, Michael Josef A1 - Vermeeren, Veronique A1 - Ameloot, Marcel A1 - Michiels, Luc A1 - Thoelen, Ronald A1 - De Ceuninck, Ward A. A1 - Wagner, Patrick T1 - Rapid assessment of the stability of DNA duplexes by impedimetric real-time monitoring of chemically induced denaturation JF - Lab on a Chip Y1 - 2011 SN - 1473-0197 VL - 11 IS - 9 SP - 1656 EP - 1663 PB - Royal Society of Chemistry (RSC) CY - Cambridge ER - TY - JOUR A1 - Murib, M. S. A1 - Grinsven, B. van A1 - Grieten, L. A1 - Janssens, S. D. A1 - Vermeeren, V. A1 - Eersels, K. A1 - Broeders, J. A1 - Ameloot, Marcel A1 - Michiels, L. A1 - Ceuninck, W. De A1 - Haenen, K. A1 - Schöning, Michael Josef A1 - Wagner, Patrick T1 - Electronic monitoring of chemical DNA denaturation on nanocrystalline diamond electrodes with different molarities and flow rates JF - Physica Status Solidi (A). Vol. 210 (2013), iss. 5 Y1 - 2013 SN - 0031-8965 SP - 911 EP - 917 PB - Wiley-VCH CY - Berlin ER - TY - JOUR A1 - Murib, M. S. A1 - Yeap, W. S. A1 - Eurlings, Y. A1 - Grinsven, B. van A1 - Boyen, H.-G. A1 - Conings, B. A1 - Michiels, L. A1 - Ameloot, Marcel A1 - Carleer, R. A1 - Warmer, J. A1 - Kaul, P. A1 - Haenen, K. A1 - Schöning, Michael Josef A1 - Ceuninck, W. de A1 - Wagner, P. T1 - Heat-transfer based characterization of DNA on synthetic sapphire chips JF - Sensors and Actuators B: Chemical N2 - In this study, we show that synthetic sapphire (Al₂O₃), an established implant material, can also serve as a platform material for biosensors comparable to nanocrystalline diamond. Sapphire chips, beads, and powder were first modified with (3-aminopropyl) triethoxysilane (APTES), followed by succinic anhydride (SA), and finally single-stranded probe DNA was EDC coupled to the functionalized layer. The presence of the APTES-SA layer on sapphire powders was confirmed by thermogravimetric analyis and Fourier-transform infrared spectroscopy. Using planar sapphire chips as substrates and X-ray photoelectron spectroscopy (XPS) as surface-sensitive tool, the sequence of individual layers was analyzed with respect to their chemical state, enabling the quantification of areal densities of the involved molecular units. Fluorescence microscopy was used to demonstrate the hybridization of fluorescently tagged target DNA to the probe DNA, including denaturation- and re-hybridization experiments. Due to its high thermal conductivity, synthetic sapphire is especially suitable as a chip material for the heat-transfer method, which was employed to distinguish complementary- and non-complementary DNA duplexes containing single-nucleotide polymorphisms. These results indicate that it is possible to detect mutations electronically with a chemically resilient and electrically insulating chip material. Y1 - 2016 U6 - https://doi.org/10.1016/j.snb.2016.02.027 SN - 0925-4005 VL - 230 IS - 230 SP - 260 EP - 271 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Kohl, Philipp A1 - Krämer, Yoka A1 - Fohry, Claudia A1 - Kraft, Bodo ED - Fred, Ana ED - Hadjali, Allel ED - Gusikhin, Oleg ED - Sansone, Carlo T1 - Scoping review of active learning strategies and their evaluation environments for entity recognition tasks JF - Deep learning theory and applications N2 - We conducted a scoping review for active learning in the domain of natural language processing (NLP), which we summarize in accordance with the PRISMA-ScR guidelines as follows: Objective: Identify active learning strategies that were proposed for entity recognition and their evaluation environments (datasets, metrics, hardware, execution time). Design: We used Scopus and ACM as our search engines. We compared the results with two literature surveys to assess the search quality. We included peer-reviewed English publications introducing or comparing active learning strategies for entity recognition. Results: We analyzed 62 relevant papers and identified 106 active learning strategies. We grouped them into three categories: exploitation-based (60x), exploration-based (14x), and hybrid strategies (32x). We found that all studies used the F1-score as an evaluation metric. Information about hardware (6x) and execution time (13x) was only occasionally included. The 62 papers used 57 different datasets to evaluate their respective strategies. Most datasets contained newspaper articles or biomedical/medical data. Our analysis revealed that 26 out of 57 datasets are publicly accessible. Conclusion: Numerous active learning strategies have been identified, along with significant open questions that still need to be addressed. Researchers and practitioners face difficulties when making data-driven decisions about which active learning strategy to adopt. Conducting comprehensive empirical comparisons using the evaluation environment proposed in this study could help establish best practices in the domain. Y1 - 2024 SN - 978-3-031-66694-0 (online ISBN) SN - 978-3-031-66693-3 (print ISBN) U6 - https://doi.org/10.1007/978-3-031-66694-0_6 SP - 84 EP - 106 PB - Springer CY - Cham ER - TY - CHAP A1 - Maurer, Florian A1 - Miskiw, Kim K. A1 - Acosta, Rebeca Ramirez A1 - Harder, Nick A1 - Sander, Volker A1 - Lehnhoff, Sebastian ED - Jorgensen, Bo Norregaard ED - Pereira da Silva, Luiz Carlos ED - Ma, Zheng T1 - Market abstraction of energy markets and policies - application in an agent-based modeling toolbox T2 - EI.A 2023: Energy Informatics N2 - In light of emerging challenges in energy systems, markets are prone to changing dynamics and market design. Simulation models are commonly used to understand the changing dynamics of future electricity markets. However, existing market models were often created with specific use cases in mind, which limits their flexibility and usability. This can impose challenges for using a single model to compare different market designs. This paper introduces a new method of defining market designs for energy market simulations. The proposed concept makes it easy to incorporate different market designs into electricity market models by using relevant parameters derived from analyzing existing simulation tools, morphological categorization and ontologies. These parameters are then used to derive a market abstraction and integrate it into an agent-based simulation framework, allowing for a unified analysis of diverse market designs. Furthermore, we showcase the usability of integrating new types of long-term contracts and over-the-counter trading. To validate this approach, two case studies are demonstrated: a pay-as-clear market and a pay-as-bid long-term market. These examples demonstrate the capabilities of the proposed framework. KW - Energy market design KW - Agent-based simulation KW - Market modeling Y1 - 2023 SN - 978-3-031-48651-7 (Print) SN - 978-3-031-48652-4 (eBook) U6 - https://doi.org/10.1007/978-3-031-48652-4_10 N1 - Third Energy Informatics Academy Conference, EI.A 2023, Campinas, Brazil, December 6–8, 2023 N1 - Part of the Lecture Notes in Computer Science book series (LNCS,volume 14468). SP - 139 EP - 157 PB - Springer CY - Cham ER - TY - CHAP A1 - Maurer, Florian A1 - Nitsch, Felix A1 - Kochems, Johannes A1 - Schimeczek, Christoph A1 - Sander, Volker A1 - Lehnhoff, Sebastian T1 - Know your tools - a comparison of two open agent-based energy market models T2 - 2024 20th International Conference on the European Energy Market (EEM) N2 - Due to the transition to renewable energies, electricity markets need to be made fit for purpose. To enable the comparison of different energy market designs, modeling tools covering market actors and their heterogeneous behavior are needed. Agent-based models are ideally suited for this task. Such models can be used to simulate and analyze changes to market design or market mechanisms and their impact on market dynamics. In this paper, we conduct an evaluation and comparison of two actively developed open-source energy market simulation models. The two models, namely AMIRIS and ASSUME, are both designed to simulate future energy markets using an agent-based approach. The assessment encompasses modelling features and techniques, model performance, as well as a comparison of model results, which can serve as a blueprint for future comparative studies of simulation models. The main comparison dataset includes data of Germany in 2019 and simulates the Day-Ahead market and participating actors as individual agents. Both models are comparable close to the benchmark dataset with a MAE between 5.6 and 6.4 €/MWh while also modeling the actual dispatch realistically. KW - Comparative simulation KW - Measurement KW - Analytical models KW - Renewable energy sources KW - Simulation KW - Instruments KW - Refining KW - Focusing KW - Agent-based modeling KW - Energy market KW - Open source KW - Energy dispatch Y1 - 2024 U6 - https://doi.org/10.1109/EEM60825.2024.10609021 N1 - 2024 20th International Conference on the European Energy Market (EEM), 10-12 June 2024, Istanbul, Turkiye PB - IEEE CY - New York, NY ER - TY - CHAP A1 - Maurer, Florian A1 - Sejdija, Jonathan A1 - Sander, Volker T1 - Decentralized energy data storages through an Open Energy Database Server N2 - In the research domain of energy informatics, the importance of open datais rising rapidly. This can be seen as various new public datasets are created andpublished. Unfortunately, in many cases, the data is not available under a permissivelicense corresponding to the FAIR principles, often lacking accessibility or reusability.Furthermore, the source format often differs from the desired data format or does notmeet the demands to be queried in an efficient way. To solve this on a small scale atoolbox for ETL-processes is provided to create a local energy data server with openaccess data from different valuable sources in a structured format. So while the sourcesitself do not fully comply with the FAIR principles, the provided unique toolbox allows foran efficient processing of the data as if the FAIR principles would be met. The energydata server currently includes information of power systems, weather data, networkfrequency data, European energy and gas data for demand and generation and more.However, a solution to the core problem - missing alignment to the FAIR principles - isstill needed for the National Research Data Infrastructure. KW - Open Data KW - Database KW - Time-series Y1 - 2024 U6 - https://doi.org/10.5281/zenodo.10607895 N1 - 1st NFDI4Energy Conference (NFDI4Energy) , Hanover, Germany, 20-21 February 2024 ER - TY - JOUR A1 - Großhauser, Christian A1 - Pettrak, Jürgen T1 - Die Rolle des Wasserstoffs in der Abwasserbehandlung JF - Wasser und Abfall N2 - Die Bereitstellung von nachhaltig erzeugtem Wasserstoff als Energieträger und Rohstoff ist eine wichtige Schlüsseltechnologie sowohl als Ersatz für fossile Energieträger, aber auch als Produkt im Zusammenhang mit Kreislaufprozessen. In der Abwasserbehandlung bestehen verschiedene Möglichkeiten Wasserstoff herzustellen. Mehrere Wege, mögliche Synergien, aber auch deren Nachteile werden vorgestellt. Y1 - 2023 U6 - https://doi.org/10.1007/s35152-023-1444-4 SN - 1436-9095 SN - 2192-8754 (eISSN) IS - 7/8 PB - Springer Fachmedien CY - Wiesbaden ER - TY - JOUR A1 - Riepl, Herbert Matthias A1 - Pettrak, Jürgen A1 - Faulstich, Martin A1 - Herrmann, Wolfgang Anton T1 - Self metathesis of fatty alcohols and amines to provide monomers for polyester and polyamide products JF - Macromolecular Symposia N2 - Self metathesis of oleochemicals offers a variety of bifunctional compounds, that can be used as monomer for polymer production. Many precursors are in huge scales available, like oleic acid ester (biodiesel), oleyl alcohol (tensides), oleyl amines (tensides, lubricants). We show several ways to produce and separate and purify C18-α,ω-bifunctional compounds, using Grubbs 2nd Generation catalysts, starting from technical grade educts. KW - fatty acid KW - metathesis KW - polyamide KW - polyester KW - renewable resources Y1 - 2010 U6 - https://doi.org/10.1002/masy.200900041 SN - 1521-3900 (eISSN) SN - 0258-0322 SN - 1022-1360 N1 - Special Issue: "Olefin Metathesis" VL - 293 IS - 1 SP - 39 EP - 42 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Uysal, Karya A1 - Firat, Ipek Serat A1 - Creutz, Till A1 - Aydin, Inci Cansu A1 - Artmann, Gerhard A1 - Teusch, Nicole A1 - Temiz Artmann, Aysegül T1 - A novel in vitro wound healing assay using free-standing, ultra-thin PDMS membranes JF - membranes N2 - Advances in polymer science have significantly increased polymer applications in life sciences. We report the use of free-standing, ultra-thin polydimethylsiloxane (PDMS) membranes, called CellDrum, as cell culture substrates for an in vitro wound model. Dermal fibroblast monolayers from 28- and 88-year-old donors were cultured on CellDrums. By using stainless steel balls, circular cell-free areas were created in the cell layer (wounding). Sinusoidal strain of 1 Hz, 5% strain, was applied to membranes for 30 min in 4 sessions. The gap circumference and closure rate of un-stretched samples (controls) and stretched samples were monitored over 4 days to investigate the effects of donor age and mechanical strain on wound closure. A significant decrease in gap circumference and an increase in gap closure rate were observed in trained samples from younger donors and control samples from older donors. In contrast, a significant decrease in gap closure rate and an increase in wound circumference were observed in the trained samples from older donors. Through these results, we propose the model of a cell monolayer on stretchable CellDrums as a practical tool for wound healing research. The combination of biomechanical cell loading in conjunction with analyses such as gene/protein expression seems promising beyond the scope published here. Y1 - 2022 U6 - https://doi.org/10.3390/membranes13010022 N1 - This article belongs to the Special Issue "Latest Scientific Discoveries in Polymer Membranes" VL - 2023 IS - 13(1) PB - MDPI CY - Basel ER - TY - THES A1 - Pettrak, Jürgen T1 - Nutzung nachwachsender Rohstoffe bei der Herstellung thermoplastischer Elastomere aus Folgeprodukten der Olefinmetathese N2 - Metathese von Ölsäure und Derivaten ist ein interessanter Weg für die Synthese bifunktioneller Verbindungen aus nachwachsenden Rohstoffen. Verwendet wurden Ru-Katalysatoren der zweiten Generation, welche eine hohe Toleranz gegenüber funktionellen Gruppen und Verunreinigungen aufweisen. Trotz des Einsatzes technischer Edukte waren Umsetzungen mit niedrigen Katalysatormengen (0.001 – 0.01 mol-%) möglich, mit Ausbeuten entsprechend der Literatur. Kreuzmetathesen ermöglichten variable Kettenlängen und Funktionalitäten der Monomere, die Produktgewinnung ist jedoch aufwändig. Selbstmetathese lieferte C18-bifunktionelle Verbindungen, welche einfach durch Destillation oder Kristallisation isoliert werden können. Neben der katalystischen Umsetzung wurde auch die Produktgewinnung untersucht und für ausgewählte Produkte auch im größeren Maßstab durchgeführt. Y1 - 2010 PB - Technische Universität München CY - München ER - TY - BOOK A1 - Staat, Manfred A1 - Heitzer, Michael T1 - Numerical methods for limit and shakedown analysis. Deterministic and probabilistic problems. Y1 - 2003 SN - 3-00-010001-6 N1 - NIC Series Vol. 15 / Ed. by Staat, M; Heitzer, M. PB - John von Neumann Institute for Computing (NIC) CY - Jülich ER - TY - JOUR A1 - Ziemons, Karl A1 - Kleines, H. A1 - Erken, I. A1 - Knoben, J. A1 - Zwoll, K. ED - Lehmann, Thomas Martin T1 - IME-DV Projekt: M-FIRBe, Multi-Modality Functional Imaging for Brain Research JF - Bildverarbeitung für die Medizin : Algorithmen - Systeme - Anwendungen Y1 - 1997 SN - 3-86073-519-5 N1 - Proceedings des Aachener Workshops am 8. u. 9. November 1996 ; WG_005 Arbeitsgruppenvorstellungen SP - 363 EP - 366 PB - Verl. der. Augustinus-Buchh. CY - Aachen ER - TY - JOUR A1 - Kleines, H. A1 - Erki, I. A1 - Ziemons, Karl A1 - Zwoll, K. ED - Lehmann, Thomas Martin T1 - ATM- und Multimedia Pilotsystem im Rahmen des Projektes M-FIBRe Aufbau und Erfahrungen JF - Bildverarbeitung für die Medizin : Algorithmen - Systeme - Anwendungen Y1 - 1997 SN - 3-86073-519-5 N1 - Proceedings des Aachener Workshops am 8. u. 9. November 1996 ; PP_001 Posterpräsentation SP - 241 EP - 248 PB - Verl. der. Augustinus-Buchh. CY - Aachen ER - TY - JOUR A1 - Erki, I. A1 - Kleines, H. A1 - Ziemons, Karl A1 - Zwoll, K. ED - Lehmann, Thomas Martin T1 - Interaktives System zur Darstellung funktionaler Bilddaten JF - Bildverarbeitung für die Medizin : Algorithmen - Systeme - Anwendungen Y1 - 1997 SN - 3-86073-519-5 N1 - Proceedings des Aachener Workshops am 8. u. 9. November 1996 ; PP_002 Posterpräsentation SP - 249 EP - 254 PB - Verl. der. Augustinus-Buchh. CY - Aachen ER - TY - JOUR A1 - Bayer, Robin A1 - Temiz Artmann, Aysegül A1 - Digel, Ilya A1 - Falkenstein, Julia A1 - Artmann, Gerhard A1 - Creutz, Till A1 - Hescheler, Jürgen T1 - Mechano-pharmacological testing of L-Type Ca²⁺ channel modulators via human vascular celldrum model JF - Cellular Physiology and Biochemistry N2 - Background/Aims: This study aimed to establish a precise and well-defined working model, assessing pharmaceutical effects on vascular smooth muscle cell monolayer in-vitro. It describes various analysis techniques to determine the most suitable to measure the biomechanical impact of vasoactive agents by using CellDrum technology. Methods: The so-called CellDrum technology was applied to analyse the biomechanical properties of confluent human aorta muscle cells (haSMC) in monolayer. The cell generated tensions deviations in the range of a few N/m² are evaluated by the CellDrum technology. This study focuses on the dilative and contractive effects of L-type Ca²⁺ channel agonists and antagonists, respectively. We analyzed the effects of Bay K8644, nifedipine and verapamil. Three different measurement modes were developed and applied to determine the most appropriate analysis technique for the study purpose. These three operation modes are called, particular time mode" (PTM), "long term mode" (LTM) and "real-time mode" (RTM). Results: It was possible to quantify the biomechanical response of haSMCs to the addition of vasoactive agents using CellDrum technology. Due to the supplementation of 100nM Bay K8644, the tension increased approximately 10.6% from initial tension maximum, whereas, the treatment with nifedipine and verapamil caused a significant decrease in cellular tension: 10nM nifedipine decreased the biomechanical stress around 6,5% and 50nM verapamil by 2,8%, compared to the initial tension maximum. Additionally, all tested measurement modes provide similar results while focusing on different analysis parameters. Conclusion: The CellDrum technology allows highly sensitive biomechanical stress measurements of cultured haSMC monolayers. The mechanical stress responses evoked by the application of vasoactive calcium channel modulators were quantified functionally (N/m²). All tested operation modes resulted in equal findings, whereas each mode features operation-related data analysis. Y1 - 2020 U6 - https://doi.org/10.33594/000000225 SN - 1421-9778 VL - 54 SP - 371 EP - 383 PB - Cell Physiol Biochem Press CY - Düsseldorf ER - TY - JOUR A1 - Kirchhof, Michael A1 - Kraft, Bodo T1 - Hybrides Vorgehensmodell : Agile und klassische Methoden im Projekt passend kombinieren JF - ProjektMagazin N2 - Agil ist im Trend und immer mehr Unternehmen, die ihre Projekte bisher nach klassischen Prinzipien durchführten, denken über den Einsatz agiler Methoden nach. Doch selbst wenn die Organisation bereits beide Philosophien unterstützt, gilt für ein Projekt meist die klare Vorgabe: agil oder klassisch. Es gibt aber noch einen anderen Ansatz, mit diesen "unterschiedlichen Welten" umzugehen: Und zwar die beiden Philosophien innerhalb eines Projekts zu kombinieren. Wie dies in der Praxis aussehen und gelingen kann, zeigen Dr. Michael Kirchhof und Prof. Dr. Bodo Kraft in diesem Beitrag. Y1 - 2012 IS - 11 PB - Berleb Media CY - Taufkirchen ER -