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Performance Analysis of Parallel Eigensolvers of two Libraries on BlueGene/P

  • Many applications in computational science and engineering require the computation of eigenvalues and vectors of dense symmetric or Hermitian matrices. For example, in DFT (density functional theory) calculations on modern supercomputers 10% to 30% of the eigenvalues and eigenvectors of huge dense matrices have to be calculated. Therefore, performance and parallel scaling of the used eigensolvers is of upmost interest. In this article different routines of the linear algebra packages ScaLAPACK and Elemental for parallel solution of the symmetric eigenvalue problem are compared concerning their performance on the BlueGene/P supercomputer. Parameters for performance optimization are adjusted for the different data distribution methods used in the two libraries. It is found that for all test cases the new library Elemental which uses a two-dimensional element by element distribution of the matrices to the processors shows better performance than the old ScaLAPACK library which uses a block-cyclic distribution.

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Metadaten
Author:Inge Gutheil, Tommy Berg, Johannes Grotendorst
DOI:https://doi.org/10.17265/2159-5291/2012.04.003
ISSN:2159-5291
Parent Title (English):Journal of Mathematics and Systems Science
Publisher:David Publishing
Place of publication:Libertyville
Document Type:Article
Language:English
Year of Completion:2012
Date of the Publication (Server):2012/12/18
Tag:Elemental; Numerical linear algebra; ScaLAPACK; eigensolvers; performance analysis
Volume:2
Issue:4
First Page:231
Last Page:236
Link:https://doi.org/10.17265/2159-5291/2012.04.003
Zugriffsart:weltweit
Institutes:FH Aachen / Fachbereich Medizintechnik und Technomathematik
collections:Verlag / David Publishing
Licence (German):License LogoCreative Commons - Namensnennung-Nicht kommerziell